Abstract
The assessment of spatial cognitive learning in rodents is a central approach in neuroscience, as it enables one to assess and quantify the effects of treatments and genetic manipulations from a broad perspective. Although the Morris water maze (MWM) is a well-validated paradigm for testing spatial learning abilities, manual categorization of performance in the MWM into behavioral strategies is subject to individual interpretation, and thus to biases. Here we offer a support vector machine (SVM) - based, automated, MWM unbiased strategy classification (MUST-C) algorithm, as well as a cognitive score scale. This model was examined and validated by analyzing data obtained from five MWM experiments with changing platform sizes, revealing a limitation in the spatial capacity of the hippocampus. We have further employed this algorithm to extract novel mechanistic insights on the impact of members of the Toll-like receptor pathway on cognitive spatial learning and memory. The MUST-C algorithm can greatly benefit MWM users as it provides a standardized method of strategy classification as well as a cognitive scoring scale, which cannot be derived from typical analysis of MWM data.
| Original language | English |
|---|---|
| Pages (from-to) | 132-144 |
| Number of pages | 13 |
| Journal | Brain, Behavior, and Immunity |
| Volume | 52 |
| DOIs | |
| State | Published - 1 Feb 2016 |
Bibliographical note
Publisher Copyright:© 2015 The Authors.
Funding
We would like to thank the following students for conducting experiments that were analyzed in this manuscript: Tzlil Margan, Daniel Cohen, Ana Hutorskoy and Yaarit Ovadia. IRF3−/− mice were generously provided by Dr. Michael Diamond and Dr. Tada Taniguchi. This study was supported by the Alzheimer’s Association Foundation and the Feder Family Fund .
| Funders |
|---|
| Alzheimer’s Association Foundation |
| Feder Family Fund |
Keywords
- Cognitive score
- Hippocampus
- Learning and memory
- Machine learning
- Morris water maze
- SVM
- Spatial learning
- Spatial resolution
- Strategy
Fingerprint
Dive into the research topics of 'Unraveling cognitive traits using the Morris water maze unbiased strategy classification (MUST-C) algorithm'. Together they form a unique fingerprint.Cite this
- APA
- Author
- BIBTEX
- Harvard
- Standard
- RIS
- Vancouver