Understanding the role of active site residues in CotB2 catalysis using a cluster model

Keren Raz, Ronja Driller, Thomas Brück, Bernhard Loll, Dan T. Major

Research output: Contribution to journalArticlepeer-review

11 Scopus citations

Abstract

Terpene cyclases are responsible for the initial cyclization cascade in the multistep synthesis of a large number of terpenes. CotB2 is a diterpene cyclase from Streptomyces melanosporofaciens, which catalyzes the formation of cycloocta-9-en-7-ol, a precursor to the next-generation anti-inflammatory drug cyclooctatin. In this work, we present evidence for the significant role of the active site's residues in CotB2 on the reaction energetics using quantum mechanical calculations in an active site cluster model. The results revealed the significant effect of the active site residues on the relative electronic energy of the intermediates and transition state structures with respect to gas phase data. A detailed understanding of the role of the enzyme environment on the CotB2 reaction cascade can provide important information towards a biosynthetic strategy for cyclooctatin and the biomanufacturing of related terpene structures.

Original languageEnglish
Pages (from-to)50-59
Number of pages10
JournalBeilstein Journal of Organic Chemistry
Volume16
DOIs
StatePublished - 8 Jan 2020

Bibliographical note

Publisher Copyright:
© 2020 Raz et al.

Keywords

  • Active site
  • CotB2 cyclase
  • Diterpene
  • Mechanism
  • Quantum mechanics

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