Unbiased estimation of precise temporal correlations between spike trains

Eran Stark, Moshe Abeles

Research output: Contribution to journalArticlepeer-review

57 Scopus citations

Abstract

A key issue in systems neuroscience is the contribution of precise temporal inter-neuronal interactions to information processing in the brain, and the main analytical tool used for studying pair-wise interactions is the cross-correlation histogram (CCH). Although simple to generate, a CCH is influenced by multiple factors in addition to precise temporal correlations between two spike trains, thus complicating its interpretation. A Monte-Carlo-based technique, the jittering method, has been suggested to isolate the contribution of precise temporal interactions to neural information processing. Here, we show that jittering spike trains is equivalent to convolving the CCH derived from the original trains with a finite window and using a Poisson distribution to estimate probabilities. Both procedures over-fit the original spike trains and therefore the resulting statistical tests are biased and have low power. We devise an alternative method, based on convolving the CCH with a partially hollowed window, and illustrate its utility using artificial and real spike trains. The modified convolution method is unbiased, has high power, and is computationally fast. We recommend caution in the use of the jittering method and in the interpretation of results based on it, and suggest using the modified convolution method for detecting precise temporal correlations between spike trains.

Original languageEnglish
Pages (from-to)90-100
Number of pages11
JournalJournal of Neuroscience Methods
Volume179
Issue number1
DOIs
StatePublished - 30 Apr 2009

Bibliographical note

Funding Information:
We thank Alit Stark for critical comments. This research was supported in part by a Center of Excellence grant (1564/04) administered by Israel Science Foundation and the Deutsch-Israelische Projectkooperation.

Funding

We thank Alit Stark for critical comments. This research was supported in part by a Center of Excellence grant (1564/04) administered by Israel Science Foundation and the Deutsch-Israelische Projectkooperation.

FundersFunder number
Center of Excellence1564/04
Deutsch-Israelische Projectkooperation
Israel Science Foundation

    Keywords

    • Correlation analysis
    • Extra-cellular recordings
    • Jittering
    • Neuronal interactions
    • Poisson distribution
    • Resampling methods
    • Spike trains
    • Temporal precision

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