TY - JOUR
T1 - Unbiased classification of spatial strategies in the Barnes maze
AU - Illouz, Tomer
AU - Madar, Ravit
AU - Clague, Charlotte
AU - Griffioen, Kathleen J.
AU - Louzoun, Yoram
AU - Okun, Eitan
N1 - Publisher Copyright:
© The Author 2016. Published by Oxford University Press. All rights reserved.
PY - 2016/11/1
Y1 - 2016/11/1
N2 - Motivation: Spatial learning is one of the most widely studied cognitive domains in neuroscience. The Morris water maze and the Barnes maze are the most commonly used techniques to assess spatial learning and memory in rodents. Despite the fact that these tasks are well-validated paradigms for testing spatial learning abilities, manual categorization of performance into behavioral strategies is subject to individual interpretation, and thus to bias. We have previously described an unbiased machine-learning algorithm to classify spatial strategies in the Morris water maze. Results: Here, we offer a support vector machine - based, automated, Barnes-maze unbiased strategy (BUNS) classification algorithm, as well as a cognitive score scale that can be used for memory acquisition, reversal training and probe trials. The BUNS algorithm can greatly benefit Barnes maze users as it provides a standardized method of strategy classification and cognitive scoring scale, which cannot be derived from typical Barnes maze data analysis.
AB - Motivation: Spatial learning is one of the most widely studied cognitive domains in neuroscience. The Morris water maze and the Barnes maze are the most commonly used techniques to assess spatial learning and memory in rodents. Despite the fact that these tasks are well-validated paradigms for testing spatial learning abilities, manual categorization of performance into behavioral strategies is subject to individual interpretation, and thus to bias. We have previously described an unbiased machine-learning algorithm to classify spatial strategies in the Morris water maze. Results: Here, we offer a support vector machine - based, automated, Barnes-maze unbiased strategy (BUNS) classification algorithm, as well as a cognitive score scale that can be used for memory acquisition, reversal training and probe trials. The BUNS algorithm can greatly benefit Barnes maze users as it provides a standardized method of strategy classification and cognitive scoring scale, which cannot be derived from typical Barnes maze data analysis.
UR - http://www.scopus.com/inward/record.url?scp=84994620526&partnerID=8YFLogxK
U2 - 10.1093/bioinformatics/btw376
DO - 10.1093/bioinformatics/btw376
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C2 - 27378295
SN - 1367-4803
VL - 32
SP - 3314
EP - 3320
JO - Bioinformatics
JF - Bioinformatics
IS - 21
ER -