The current landscape of adaptive immune receptor genomic and repertoire data: OGRDB and VDJbase

  • William D. Lees
  • , Ayelet Peres
  • , Vered Klein
  • , Naama Amos
  • , Uddalok Jana
  • , Eric Engelbrecht
  • , Zachary Vanwinkle
  • , Yaniv Malach
  • , Thomas Konstantinovsky
  • , Pazit Polak
  • , Corey T. Watson
  • , Gur Yaari

Research output: Contribution to journalArticlepeer-review

1 Scopus citations

Abstract

Accurate characterization of adaptive immune receptor repertoires through high-throughput sequencing is critical for understanding immune responses, disease biomarkers, vaccine design, and antibody engineering. However, progress depends on precise knowledge of germline reference sequences, which are challenging to define due to extensive allelic variation and structural complexity in immunoglobulin and T cell receptor loci. To address these challenges, we present major updates to two complementary community resources: the Open Germline Receptor Database (https://ogrdb.airr-community.org) and VDJbase (https://www.vdjbase.org). These resources enable reproducible, evidence-based analysis of immune receptor diversity across populations and species, supporting both fundamental immunology research and precision medicine applications.

Original languageEnglish
Pages (from-to)D932-D937
JournalNucleic Acids Research
Volume54
Issue number1
DOIs
StatePublished - 6 Jan 2026

Bibliographical note

Publisher Copyright:
© The Author(s) 2025. Published by Oxford University Press.

UN SDGs

This output contributes to the following UN Sustainable Development Goals (SDGs)

  1. SDG 3 - Good Health and Well-being
    SDG 3 Good Health and Well-being

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