Structural basis for sarm1 inhibition and activation under energetic stress

Michael Sporny, Julia Guez-Haddad, Tami Khazma, Avraham Yaron, Moshe Dessau, Yoel Shkolnisky, Carsten Mim, Michail N. Isupov, Ran Zalk, Michael Hons, Yarden Opatowsky

Research output: Contribution to journalArticlepeer-review

93 Scopus citations

Abstract

SARM1, an executor of axonal degeneration, displays NADase activity that depletes the key cellular metabolite, NAD+, in response to nerve injury. The basis of SARM1 inhibition and its activation under stress conditions are still unknown. Here, we present cryo-EM maps of SARM1 at 2.9 and 2.7 Å resolutions. These indicate that SARM1 homo-octamer avoids premature activation by assuming a packed conformation, with ordered inner and peripheral rings, that prevents dimerization and activation of the catalytic domains. This inactive conformation is stabilized by binding of SARM1’s own substrate NAD+ in an allosteric location, away from the catalytic sites. This model was validated by mutagenesis of the allosteric site, which led to constitutively active SARM1. We propose that the reduction of cellular NAD+ concentration contributes to the disassembly of SARM1’s peripheral ring, which allows formation of active NADase domain dimers, thereby further depleting NAD+ to cause an energetic catastrophe and cell death.

Original languageEnglish
Article numbere62021
Pages (from-to)1-25
Number of pages25
JournaleLife
Volume9
DOIs
StatePublished - 13 Nov 2020

Bibliographical note

Publisher Copyright:
© Sporny et al.

Funding

We thank the staff of beamline CM01 of ESRF and members of the Opatowsky lab for technical assistance. We thank Matan Avivi for technical help with HPLC and Gershon Kunin for IT management. This work was supported by funds from ISF grants no. 1425/15 and 909/19 to YO. AY is an incumbent of the Jack and Simon Djanogly Professorial Chair in Biochemistry.

FundersFunder number
European Synchrotron Radiation Facility
Israel Science Foundation909/19, 1425/15

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