Quantitative analysis of phenotypic elements augments traditional electroclinical classification of common familial epilepsies

Epi4K Consortium

Research output: Contribution to journalArticlepeer-review

Abstract

Objective: Classification of epilepsy into types and subtypes is important for both clinical care and research into underlying disease mechanisms. A quantitative, data-driven approach may augment traditional electroclinical classification and shed new light on existing classification frameworks. Methods: We used latent class analysis, a statistical method that assigns subjects into groups called latent classes based on phenotypic elements, to classify individuals with common familial epilepsies from the Epi4K Multiplex Families study. Phenotypic elements included seizure types, seizure symptoms, and other elements of the medical history. We compared class assignments to traditional electroclinical classifications and assessed familial aggregation of latent classes. Results: A total of 1120 subjects with epilepsy were assigned to five latent classes. Classes 1 and 2 contained subjects with generalized epilepsy, largely reflecting the distinction between absence epilepsies and younger onset (class 1) versus myoclonic epilepsies and older onset (class 2). Classes 3 and 4 contained subjects with focal epilepsies, and in contrast to classes 1 and 2, these did not adhere as closely to clinically defined focal epilepsy subtypes. Class 5 contained nearly all subjects with febrile seizures plus or unknown epilepsy type, as well as a few subjects with generalized epilepsy and a few with focal epilepsy. Family concordance of latent classes was similar to or greater than concordance of clinically defined epilepsy types. Significance: Quantitative classification of epilepsy has the potential to augment traditional electroclinical classification by (1) combining some syndromes into a single class, (2) splitting some syndromes into different classes, (3) helping to classify subjects who could not be classified clinically, and (4) defining the boundaries of clinically defined classifications. This approach can guide future research, including molecular genetic studies, by identifying homogeneous sets of individuals that may share underlying disease mechanisms.

Original languageEnglish
Pages (from-to)2194-2203
Number of pages10
JournalEpilepsia
Volume60
Issue number11
DOIs
StatePublished - 1 Nov 2019

Bibliographical note

Publisher Copyright:
Wiley Periodicals, Inc. © 2019 International League Against Epilepsy

Funding

We thank the families for participating in this study. This project was supported by a National Institute of Health (NIH) National Institute of Neurological Disorders and Stroke grant (U01NS077367). S.F.B. and I.E.S. were supported by an Australian National Health and Medical Research Council program grant (628952) and practitioner fellowship (I.E.S). R.O. was supported by NIH grants R01 NS078419, R01 NS104076, and RM1 HG007257. M.P.E. was supported by NIH grant R01 GM117946. M.I.R., W.O.P., R.H.T., and P.E.M.S. were supported by the National Institute of Social Care and Health Research, Epilepsy Research UK, and the Waterloo Foundation. L.G.S and I.E.S were supported by a Health Research Council of New Zealand grant (10/402) and Curekids. C.A.E. was supported by a Ruth L. Kirschstein National Research Service Award institutional research training grant (T32 NS091008‐01).

FundersFunder number
I.E.S.R01 NS078419, R01 GM117946, RM1 HG007257, R01 NS104076
I.E.S.
National Institutes of Health
Foundation for the National Institutes of Health
National Institute of Neurological Disorders and StrokeT32NS091008, U01NS077367
National Institute for Social Care and Health Research
Waterloo Foundation
Epilepsy Research UK
National Health and Medical Research Council628952
Health Research Council of New Zealand10/402, T32 NS091008‐01

    Keywords

    • epilepsy
    • genetics
    • latent class analysis
    • phenotype

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