TY - GEN
T1 - On the longest common parameterized subsequence
AU - Keller, Orgad
AU - Kopelowitz, Tsvi
AU - Lewenstein, Moshe
PY - 2008
Y1 - 2008
N2 - The well-known problem of the longest common subsequence (LCS), of two strings of lengths n and m respectively, is O(nm)-time solvable and is a classical distance measure for strings. Another well-studied string comparison measure is that of parameterized matching, where two equal-length strings are a parameterized-match if there exists a bijection on the alphabets such that one string matches the other under the bijection. All works associated with parameterized pattern matching present polynomial time algorithms. There have been several attempts to accommodate parameterized matching along with other distance measures, as these turn out to be natural problems, e.g., Hamming distance, and a bounded version of edit-distance. Several algorithms have been proposed for these problems. In this paper we consider the longest common parameterized subsequence problem which combines the LCS measure with parameterized matching. We prove that the problem is NP-hard, and then show a couple of approximation algorithms for the problem.
AB - The well-known problem of the longest common subsequence (LCS), of two strings of lengths n and m respectively, is O(nm)-time solvable and is a classical distance measure for strings. Another well-studied string comparison measure is that of parameterized matching, where two equal-length strings are a parameterized-match if there exists a bijection on the alphabets such that one string matches the other under the bijection. All works associated with parameterized pattern matching present polynomial time algorithms. There have been several attempts to accommodate parameterized matching along with other distance measures, as these turn out to be natural problems, e.g., Hamming distance, and a bounded version of edit-distance. Several algorithms have been proposed for these problems. In this paper we consider the longest common parameterized subsequence problem which combines the LCS measure with parameterized matching. We prove that the problem is NP-hard, and then show a couple of approximation algorithms for the problem.
UR - http://www.scopus.com/inward/record.url?scp=45849125410&partnerID=8YFLogxK
U2 - 10.1007/978-3-540-69068-9_28
DO - 10.1007/978-3-540-69068-9_28
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AN - SCOPUS:45849125410
SN - 3540690662
SN - 9783540690665
T3 - Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics)
SP - 303
EP - 315
BT - Combinatorial Pattern Matching - 19th Annual Symposium, CPM 2008, Proceedings
T2 - 19th Annual Symposium on Combinatorial Pattern Matching, CPM 2008
Y2 - 18 June 2008 through 20 June 2008
ER -