Novel spectral imaging system combining spectroscopy with imaging applications for biology

Z. Malik, D Cabib, RA Buckwald, Y. Garini, DG Soenksen

Research output: Chapter in Book/Report/Conference proceedingConference contributionpeer-review

Abstract

A novel analytical spectral-imaging system and its results in the examination of biological specimens are presented. The SpectraCube 1000 system measures the transmission, absorbance, or fluorescence spectra of images studied by light microscopy. The system is based on an interferometer combined with a CCD camera, enabling measurement of the interferogram for each pixel constructing the image. Fourier transformation of the interferograms derives pixel by pixel spectra for 170 X 170 pixels of the image. A special `similarity mapping' program has been developed, enabling comparisons of spectral algorithms of all the spatial and spectral information measured by the system in the image. By comparing the spectrum of each pixel in the specimen with a selected reference spectrum (similarity mapping), there is a depiction of the spatial distribution of macromolecules possessing the characteristics of the reference spectrum. The system has been applied to analyses of bone marrow blood cells as well as fluorescent specimens, and has revealed information which could not be unveiled by other techniques. Similarity mapping has enabled visualization of fine details of chromatin packing in the nucleus of cells and other cytoplasmic compartments. Fluorescence analysis by the system has enabled the determination of porphyrin concentrations and distribution in cytoplasmic organelles of living cells.
Original languageAmerican English
Title of host publicationInternational Symposium on Biomedical Optics Europe'94
StatePublished - 1994

Bibliographical note

International Society for Optics and Photonics;
Place of conference:Lille, France

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