NMR-based molecular ruler for determining the depth of intercalants within the lipid bilayer. Part IV: Studies on ketophospholipids

Michal Afri, Carmit Alexenberg, Pinchas Aped, Efrat Bodner, Sarit Cohen, Michal Ejgenberg, Shlomi Eliyahu, Pessia Gilinsky-Sharon, Yifat Harel, Miriam E. Naqqash, Hani Porat, Ayala Ranz, Aryeh A. Frimer

Research output: Contribution to journalArticlepeer-review

4 Scopus citations


In our companion paper, we described the preparation and intercalation of two homologous series of dicarbonyl compounds, methyl n-oxooctadecanoates and the corresponding n-oxooctadecanoic acids (n = 4-16), into DMPC liposomes. 13C NMR chemical shift of the various carbonyls was analyzed using an ET(30) solvent polarity-chemical shift correlation table and the corresponding calculated penetration depth (in A˚). An iterative best fit analysis of the data points revealed an exponential correlation between ET(30) micropolarity and the penetration depth (in A˚) into the liposomal bilayer. However, this study is still incomplete, since the plot lacks data points in the important area of moderately polarity, i.e., in the ET (30) range of 51- 45.5 kcal/mol. To correct this lacuna, a family of ketophospholipids was prepared in which the above n-oxooctadecanoic acids were attached to the sn-2 position of a phosphatidylcholine with a palmitic acid chain at sn-1. To assist in assignment and detection several derivatives were prepared 13C-enriched in both carbonyls. The various homologs were intercalated into DMPC liposomes and give points specifically in the missing area of the previous polarity-penetration correlation graph. Interestingly, the calculated exponential relationship of the complete graph was essentially the same as that calculated in the companion paper based on the methyl n-oxooctadecanoates and the corresponding n-oxooctadecanoic acids alone. The polarity at the midplane of such DMPC systems is ca. 33 kcal/mol and is not expected to change very much if we extend the lipid chains. This paper concludes with a chemical ruler that maps the changing polarity experienced by an intercalant as it penetrates the liposomal bilayer.

Original languageEnglish
Pages (from-to)119-128
Number of pages10
JournalChemistry and Physics of Lipids
StatePublished - Dec 2014

Bibliographical note

Publisher Copyright:
© 2014 Elsevier Ireland Ltd. All rights reserved.


We acknowledge the kind and generous support of the Israel Science Foundation (Grants Number 327/02 and 437/06 ) – founded by The Israel Academy of Sciences and Humanities, and The Ethel and David Resnick Chair in Active Oxygen Chemistry.

FundersFunder number
Israel Academy of Sciences and Humanities
Israel Science Foundation327/02, 437/06


    • <sup>13</sup>C NMR
    • DMPC
    • E<inf>T</inf>
    • Ketophospholipids
    • Liposome
    • Molecular ruler


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