Mitochondrial genome of the intertidal acorn barnacle Tetraclita serrata Darwin, 1854 (Crustacea: Sessilia): Gene order comparison and phylogenetic consideration within Sessilia

Xin Shen, Ling Ming Tsang, Ka Hou Chu, Yair Achituv, Benny Kwok Kan Chan

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16 Scopus citations

Abstract

The complete mitochondrial genome of the intertidal barnacle Tetraclita serrata Darwin, 1854 (Crustacea: Maxillopoda: Sessilia) is presented. The genome is a circular molecule of 15,200 bp, which encodes 13 PCGs, 2 ribosomal RNA genes, and 22 transfer RNA genes. All non-coding regions are 591 bp in length, with the longest one speculated as the control region (389. bp), which is located between srRNA and trnK. The overall A + T content of the mitochondrial genome of T serrata is 65.4%, which is lowest among all the eight mitochondrial genomes reported from sessile barnacles. There are variations of initiation and stop codons in the reported sessile barnacle mitochondrial genomes. Large-scale gene rearrangements are found in these genomes as compared to the pancrustacean ground pattern. ML and Bayesian analyses of all 15 complete mitochondrial genomes available from Maxillopoda lead to identical phylogenies. The phylogenetic tree based on mitochondrial PCGs shows that Argulus americanus (Branchiura) cluster with Armillifer armillatus (Pentastomida), distinct from all ten species from Cirripedia. Within the order Sessilia, Amphibalanus amphitrite (Balanidae) clusters with Striatobalanus amaryllis (Archaeobalanidae), and Nobia grandis (Pyrgomatidae). However, the two Megabalanus (Balanidae) are separated from the above grouping, resulting in non-monophyly of the family Balanidae. Moreover, the two Megabalanus have large-scale rearrangements as compared to the gene order shared by former three species. Therefore, both phylogenetic analysis using PCG sequences and gene order comparison suggest that Balanidae is not a monophyletic group. Given the limited taxa and moderate support values of the internal branches, the non-monophyly of the family Balanidae requires further verification.

Original languageEnglish
Pages (from-to)63-69
Number of pages7
JournalMarine Genomics
Volume22
DOIs
StatePublished - 1 Aug 2015

Bibliographical note

Publisher Copyright:
© 2015 Elsevier B.V.

Funding

We thank Cheung Kwok Chu for his crucial comments. This work was sponsored by grants from the Ministry of Science and Technology, Taiwan ( NSC103-2621-B-001-002 to BKKC and NSC103-2621-B-019-004-MY2 to LMT), Open-end Fund of Jiangsu Key Laboratory of Marine Biotechnology ( 2014HS003 ), Huaihai Institute of Technology Natural Science Fund ( Z2014019 ), project funded by the Priority Academic Program Development (PAPD) of Jiangsu Higher Education Institutions , and Jiangsu 333 and Lianyungang 521 Talent Projects . The work of YA was supported by grant of the Israel Science Foundation (ISF) . Thanks the Genomics Bioscience and Technology Co. Ltd. (Taiwan) for supporting the mitochondrial genome sequencing.

FundersFunder number
Huaihai Institute of Technology Natural Science FundZ2014019
Jiangsu 333
Open-end Fund of Jiangsu Key Laboratory of Marine Biotechnology2014HS003
Israel Science Foundation
Ministry of Science and Technology, TaiwanNSC103-2621-B-001-002, NSC103-2621-B-019-004-MY2
Priority Academic Program Development of Jiangsu Higher Education Institutions

    Keywords

    • Crustacea
    • Gene rearrangement
    • Mitochondrial genome
    • Phylogeny
    • Sessilia
    • Tetraclita serrata

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