Metastable tight knots in a wormlike polymer

Alexander Y. Grosberg, Yitzhak Rabin

Research output: Contribution to journalArticlepeer-review

83 Scopus citations

Abstract

Based on an estimate of the knot entropy of a wormlike chain we predict that the interplay of bending energy and confinement entropy will result in a compact metastable configuration of the knot that will diffuse, without spreading, along the contour of the semiflexible polymer until it reaches one of the chain ends. Our estimate of the size of the knot as a function of its topological invariant (ideal aspect ratio) agrees with recent experimental results of knotted dsDNA. Further experimental tests of our ideas are proposed.

Original languageEnglish
Article number217801
JournalPhysical Review Letters
Volume99
Issue number21
DOIs
StatePublished - 20 Nov 2007

Funding

FundersFunder number
National Science Foundation
Directorate for Mathematical and Physical Sciences0212302

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