L1 pattern matching lower bound

Ohad Lipsky, Ely Porat

Research output: Chapter in Book/Report/Conference proceedingConference contributionpeer-review

2 Scopus citations

Abstract

Let a text string T = t0, . . ., tn-1 and a pattern string P = Po, . . ., pm-1 ti, pj ∈ IN be given. In The Approximate Pattern Matching in the L1 metric problem (L1-matching for short) the output is, for every text location i, the L1 distance between the pattern and the length m substring of the text starting at i, i.e. ∑i=0m-1|ti+j - pj|. The Less Than Matching problem is that of finding all locations i of T where ti+j ≥ Pj j = 0, . . ., m-1. The String Matching with Mismatches problem is that of finding the number of mismatches between the pattern and every length m substring of the text. For the three above problems, the fastest known deterministic solution is O(n√m log m) time. In this paper we show that the latter two problems can be linearly reduced to the problem of L1-matching.

Original languageEnglish
Title of host publicationString Processing and Information Retrieval - 12th International Conference, SPIRE 2005, Proceedings
Pages327-330
Number of pages4
DOIs
StatePublished - 2005
Event12th International Conference on String Processing and Information Retrieval, SPIRE 2005 - Buenos Aires, Argentina
Duration: 2 Nov 20054 Nov 2005

Publication series

NameLecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics)
Volume3772 LNCS
ISSN (Print)0302-9743
ISSN (Electronic)1611-3349

Conference

Conference12th International Conference on String Processing and Information Retrieval, SPIRE 2005
Country/TerritoryArgentina
CityBuenos Aires
Period2/11/054/11/05

Fingerprint

Dive into the research topics of 'L1 pattern matching lower bound'. Together they form a unique fingerprint.

Cite this