Abstract
Hepatitis E virus ORF1 encoded non-structural polyprotein (nsP) consist of multiple domains, namely: Methyltransferase, Y-domain, Protease, X-domain, Helicase and RNA dependent RNA polymerase. We have attempted to identify human liver cell proteins that are interacting with HEV ORF1 encoded functional domains by using Y2H screening. A total of 155 protein-protein interactions between HEV-ORF1 and human proteins were identified. Comparative analysis of the HEV-ORF1-Human interaction network with reconstructed human interactome showed that the cellular proteins interacting with HEV-ORF1 are central and interconnected. Enrichment analysis of Gene Ontology and cellular pathways showed that the viral proteins preferentially interacted with the proteins of metabolism and energy generation along with host immune response and ubiquitin proteasomal pathways. The mTOR and focal adhesion pathways were also targeted by the virus. These interactions suggest that HEV probably utilizes important proteins in carbohydrate metabolism, energy generation and iron homoeostasis in the host cells during its establishment.
Original language | English |
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Pages (from-to) | 195-204 |
Number of pages | 10 |
Journal | Virus Research |
Volume | 213 |
DOIs | |
State | Published - 2 Feb 2016 |
Externally published | Yes |
Bibliographical note
Publisher Copyright:© 2015 Elsevier B.V.
Funding
Funding to carry out this research was provided by the intramural grant of the National Institute of Virology, Pune (Grant ID: HEP 1104 ). N.K.O. received graduate research fellowship from the Council for Scientific and Industrial Research, Government of India (Grant ID: 09/698[0015]/2009-EMR-1 ).
Funders | Funder number |
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National Institute of Virology | HEP 1104 |
Council of Scientific and Industrial Research, India | 09/698[0015]/2009-EMR-1 |
Keywords
- Gene Ontology
- Virus-host interaction
- Yeast two hybrid