Fractal landscape analysis of DNA walks

C. K. Peng; S. V. Buldyrev; A. L. Goldberger; S. Havlin; F. Sciortino; M. Simons; H. E. Stanley

doi:10.1016/0378-4371(92)90500-P

Fractal landscape analysis of DNA walks

C. K. Peng, S. V. Buldyrev, A. L. Goldberger, S. Havlin, F. Sciortino, M. Simons, H. E. Stanley

Department of Physics

Research output: Contribution to journal › Article › peer-review

40 Scopus citations

Abstract

By mapping nucleotide sequences onto a "DNA walk", we uncovered remarkably long-range power law correlations [Nature 356 (1992) 168] that simply a new scale invariant property of DNA. We found such long-range correlations in intron-containing genes and in non-transcribed regulatory DNA sequences, but not in cDNA sequences or intron-less genes. In this paper, we present more explicit evidences to support our findings.

Original language	English
Pages (from-to)	25-29
Number of pages	5
Journal	Physica A: Statistical Mechanics and its Applications
Volume	191
Issue number	1-4
DOIs	https://doi.org/10.1016/0378-4371(92)90500-P
State	Published - 15 Dec 1992

Bibliographical note

Funding Information:
We wish to thank J. Hausdorff for important contributions in the initial stageso f this project, and C. Cantor, C. DeLisi, R.D. Rosenberg,M . Schwartz and E. Trifonov for valuabled iscussionsP. artial supportw as provided to ALG by the G. Harold and Leila Y. Mathers Charitable Foundation, the National Heart, Lung and Blood Institute and the National Aeronautics and Space Administration, to MS by the American Heart Association, to CKP by the NJH Graduate Traineeship Award, and to HES by the NSF.

Funding

We wish to thank J. Hausdorff for important contributions in the initial stageso f this project, and C. Cantor, C. DeLisi, R.D. Rosenberg,M . Schwartz and E. Trifonov for valuabled iscussionsP. artial supportw as provided to ALG by the G. Harold and Leila Y. Mathers Charitable Foundation, the National Heart, Lung and Blood Institute and the National Aeronautics and Space Administration, to MS by the American Heart Association, to CKP by the NJH Graduate Traineeship Award, and to HES by the NSF.

Funders	Funder number
National Science Foundation
National Aeronautics and Space Administration
American Heart Association
G. Harold and Leila Y. Mathers Charitable Foundation

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10.1016/0378-4371(92)90500-P

Cite this

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abstract = "By mapping nucleotide sequences onto a {"}DNA walk{"}, we uncovered remarkably long-range power law correlations [Nature 356 (1992) 168] that simply a new scale invariant property of DNA. We found such long-range correlations in intron-containing genes and in non-transcribed regulatory DNA sequences, but not in cDNA sequences or intron-less genes. In this paper, we present more explicit evidences to support our findings.",

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AU - Goldberger, A. L.

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AU - Sciortino, F.

AU - Simons, M.

AU - Stanley, H. E.

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AB - By mapping nucleotide sequences onto a "DNA walk", we uncovered remarkably long-range power law correlations [Nature 356 (1992) 168] that simply a new scale invariant property of DNA. We found such long-range correlations in intron-containing genes and in non-transcribed regulatory DNA sequences, but not in cDNA sequences or intron-less genes. In this paper, we present more explicit evidences to support our findings.

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Fractal landscape analysis of DNA walks

Abstract

Bibliographical note

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