Abstract
Knowledge of immunoglobulin and T cell receptor encoding genes is derived from high-quality genomic sequencing. High-throughput sequencing is delivering large volumes of data, and precise, high-throughput approaches to annotation are needed. Digger is an automated tool that identifies coding and regulatory regions of these genes, with results comparable to those obtained by current expert curational methods. Availability and implementation: Digger is published under open source license at https://github.com/williamdlees/Digger and is available as a Python package and a Docker container.
Original language | English |
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Article number | btae144 |
Journal | Bioinformatics |
Volume | 40 |
Issue number | 3 |
DOIs | |
State | Published - 4 Mar 2024 |
Bibliographical note
Publisher Copyright:© The Author(s) 2024. Published by Oxford University Press. This is an Open Access article distributed under the terms of the Creative Commons Attribution License (https://creativecommons.org/licenses/by/4.0/), which permits unrestricted reuse, distribution, and reproduction in any medium, provided the original work is properly cited.