Dataset for the Synthesis of Boron-Dipyrrin Dyes, their fluorescent properties, their interaction with proteins, Triton-X-based surfactants, and micellar clusterization approaches to validation based on fluorescent dyes

Aleksei V. Solomonov; Yuriy S. Marfin; Alexander B. Tesler; Dmitry A. Merkushev; Elizaveta A. Bogatyreva; Elena V. Antina; Evgeniy V. Rumyantsev; Ulyana Shimanovich

doi:10.1016/j.dib.2022.108464

Dataset for the Synthesis of Boron-Dipyrrin Dyes, their fluorescent properties, their interaction with proteins, Triton-X-based surfactants, and micellar clusterization approaches to validation based on fluorescent dyes

Aleksei V. Solomonov, Yuriy S. Marfin, Alexander B. Tesler, Dmitry A. Merkushev, Elizaveta A. Bogatyreva, Elena V. Antina, Evgeniy V. Rumyantsev, Ulyana Shimanovich

Research output: Contribution to journal › Article › peer-review

1 Scopus citations

Abstract

The data presented here refer to the research article by Aleksei V. Solomonov, Yuriy S. Marfin, Alexander B. Tesler, Dmitry A. Merkushev, Elizaveta A. Bogatyreva, Elena V. Antina, Evgeniy V. Rumyantsev, and Ulyana Shimanovich “Spanning BODIPY fluorescence with self-assembled micellar clusters”, Colloids and Surfaces B: Biointerfaces, 216, 2022, 112532. The present article provides details on optical characterization for a set of meso- and tetra-substituted boron-dipyrrin (BODIPY) complexes encapsulated inside of self-assembled Triton-X-based micellar coordination clusters (MCCs), based on Triton-X family surfactants. Changes in the optical properties of the BODIPY complexes upon interaction with bovine serum albumin, in a binary mixture of THF:H₂O and titrated with Triton TX-114, were evaluated. The optical properties and the formation kinetics of the BODIPY-based MCCs and the BODIPY-supported micelle chelator aggregates (MCAs) are presented as well. The presented data provide additional insights into the structural and formation aspects of both the traditional and newly obtained micellar coordination clusters for their future optimization, control, and application. The synthetic procedures for the synthesis of a set of meso- and tetra-substituted BODIPY complexes and their optical properties in different media are also presented. The research is related to the paper (Solomonov et al., 2022).

Original language	English
Article number	108464
Journal	Data in Brief
Volume	43
DOIs	https://doi.org/10.1016/j.dib.2022.108464
State	Published - Aug 2022
Externally published	Yes

Bibliographical note

Publisher Copyright:
© 2022 The Author(s)

Funding

This work was supported by a grant from the Government of the State of Israel No. 1504994 for research at Ariel University, Israel, 2014 – 2015 (AS). The work was carried out with partial support of the President's grant for young scientists - doctors of science (MD-2300.2022.1.3). BODIPY conjugation was via clusterization. BODIPY aggregation was carried out in solution and clusters. YM, DM). US acknowledges financial support from the Gruber Foundation, the Nella and Leon Benoziyo Center for Neurological Diseases, the Minerva Foundation, and an Alon fellowship (Israeli Council for Higher Education). In addition, US thanks the Perlman family for funding the Shimanovich Lab at the Weizmann Institute of Science, Israel: "This research is made possible in part by the historic generosity of the Harold Perlman Family". This work was also supported by a research grant from the Anita James Rosen Foundation, the Weizmann Institute of Science, Israel. The authors are grateful to Dr. Guy Patchornik (Department of Chemical Sciences, Ariel University, Israel) for his assistance, valuable comments, suggestions, and fruitful discussions. The authors are grateful to Dr. Natalya Bumagina (G.A. Krestov Institute of Solution Chemistry of the Russian Academy of Sciences, Ivanovo, Russian Federation) for the help in experiments description and Prof. Mikhail Berezin (G.A. Krestov Institute of Solution Chemistry of the Russian Academy of Sciences, Ivanovo, Russian Federation) for the help in the synthesis and identification of BODIPY compounds. Molecular graphics and analyses were performed with UCSF ChimeraX and Chimera, developed by the Resource for Biocomputing, Visualization, and Informatics at the University of California, San Francisco, with support from the National Institutes of Health R01-GM129325 and NIH P41-GM103311 and the Office of Cyber Infrastructure and Computational Biology, the National Institute of Allergy and Infectious Diseases. The authors are grateful to Steve Manch for editing the English in the manuscript.

Funders	Funder number
Anita James Rosen Foundation
Department of Chemical Sciences
Government of the State of Israel	1504994
Perlman family for funding the Shimanovich Lab
Weizmann Institute of Science, Israel
National Institutes of Health	R01-GM129325, P41-GM103311
National Institute of Allergy and Infectious Diseases
Gruber Foundation
Minerva Foundation
Russian Academy of Sciences
Council for Higher Education
Ariel University	MD-2300.2022.1.3

Keywords

BODIPY
Encapsulation
Fluorescent dyes
Proteins
Self-assembly
Solubilization
Surfactant micelles
Synthesis

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Solomonov, A. V., Marfin, Y. S., Tesler, A. B., Merkushev, D. A., Bogatyreva, E. A., Antina, E. V., Rumyantsev, E. V., & Shimanovich, U. (2022). Dataset for the Synthesis of Boron-Dipyrrin Dyes, their fluorescent properties, their interaction with proteins, Triton-X-based surfactants, and micellar clusterization approaches to validation based on fluorescent dyes. Data in Brief, 43, Article 108464. https://doi.org/10.1016/j.dib.2022.108464

@article{efc917612230497e8afd4c86444a51ed,

title = "Dataset for the Synthesis of Boron-Dipyrrin Dyes, their fluorescent properties, their interaction with proteins, Triton-X-based surfactants, and micellar clusterization approaches to validation based on fluorescent dyes",

abstract = "The data presented here refer to the research article by Aleksei V. Solomonov, Yuriy S. Marfin, Alexander B. Tesler, Dmitry A. Merkushev, Elizaveta A. Bogatyreva, Elena V. Antina, Evgeniy V. Rumyantsev, and Ulyana Shimanovich “Spanning BODIPY fluorescence with self-assembled micellar clusters”, Colloids and Surfaces B: Biointerfaces, 216, 2022, 112532. The present article provides details on optical characterization for a set of meso- and tetra-substituted boron-dipyrrin (BODIPY) complexes encapsulated inside of self-assembled Triton-X-based micellar coordination clusters (MCCs), based on Triton-X family surfactants. Changes in the optical properties of the BODIPY complexes upon interaction with bovine serum albumin, in a binary mixture of THF:H2O and titrated with Triton TX-114, were evaluated. The optical properties and the formation kinetics of the BODIPY-based MCCs and the BODIPY-supported micelle chelator aggregates (MCAs) are presented as well. The presented data provide additional insights into the structural and formation aspects of both the traditional and newly obtained micellar coordination clusters for their future optimization, control, and application. The synthetic procedures for the synthesis of a set of meso- and tetra-substituted BODIPY complexes and their optical properties in different media are also presented. The research is related to the paper (Solomonov et al., 2022).",

keywords = "BODIPY, Encapsulation, Fluorescent dyes, Proteins, Self-assembly, Solubilization, Surfactant micelles, Synthesis",

author = "Solomonov, {Aleksei V.} and Marfin, {Yuriy S.} and Tesler, {Alexander B.} and Merkushev, {Dmitry A.} and Bogatyreva, {Elizaveta A.} and Antina, {Elena V.} and Rumyantsev, {Evgeniy V.} and Ulyana Shimanovich",

note = "Publisher Copyright: {\textcopyright} 2022 The Author(s)",

year = "2022",

month = aug,

doi = "10.1016/j.dib.2022.108464",

language = "אנגלית",

volume = "43",

journal = "Data in Brief",

issn = "2352-3409",

publisher = "Elsevier Inc.",

}

Solomonov, AV, Marfin, YS, Tesler, AB, Merkushev, DA, Bogatyreva, EA, Antina, EV, Rumyantsev, EV & Shimanovich, U 2022, 'Dataset for the Synthesis of Boron-Dipyrrin Dyes, their fluorescent properties, their interaction with proteins, Triton-X-based surfactants, and micellar clusterization approaches to validation based on fluorescent dyes', Data in Brief, vol. 43, 108464. https://doi.org/10.1016/j.dib.2022.108464

Dataset for the Synthesis of Boron-Dipyrrin Dyes, their fluorescent properties, their interaction with proteins, Triton-X-based surfactants, and micellar clusterization approaches to validation based on fluorescent dyes. / Solomonov, Aleksei V.; Marfin, Yuriy S.; Tesler, Alexander B. et al.
In: Data in Brief, Vol. 43, 108464, 08.2022.

Research output: Contribution to journal › Article › peer-review

TY - JOUR

T1 - Dataset for the Synthesis of Boron-Dipyrrin Dyes, their fluorescent properties, their interaction with proteins, Triton-X-based surfactants, and micellar clusterization approaches to validation based on fluorescent dyes

AU - Solomonov, Aleksei V.

AU - Marfin, Yuriy S.

AU - Tesler, Alexander B.

AU - Merkushev, Dmitry A.

AU - Bogatyreva, Elizaveta A.

AU - Antina, Elena V.

AU - Rumyantsev, Evgeniy V.

AU - Shimanovich, Ulyana

PY - 2022/8

Y1 - 2022/8

N2 - The data presented here refer to the research article by Aleksei V. Solomonov, Yuriy S. Marfin, Alexander B. Tesler, Dmitry A. Merkushev, Elizaveta A. Bogatyreva, Elena V. Antina, Evgeniy V. Rumyantsev, and Ulyana Shimanovich “Spanning BODIPY fluorescence with self-assembled micellar clusters”, Colloids and Surfaces B: Biointerfaces, 216, 2022, 112532. The present article provides details on optical characterization for a set of meso- and tetra-substituted boron-dipyrrin (BODIPY) complexes encapsulated inside of self-assembled Triton-X-based micellar coordination clusters (MCCs), based on Triton-X family surfactants. Changes in the optical properties of the BODIPY complexes upon interaction with bovine serum albumin, in a binary mixture of THF:H2O and titrated with Triton TX-114, were evaluated. The optical properties and the formation kinetics of the BODIPY-based MCCs and the BODIPY-supported micelle chelator aggregates (MCAs) are presented as well. The presented data provide additional insights into the structural and formation aspects of both the traditional and newly obtained micellar coordination clusters for their future optimization, control, and application. The synthetic procedures for the synthesis of a set of meso- and tetra-substituted BODIPY complexes and their optical properties in different media are also presented. The research is related to the paper (Solomonov et al., 2022).

AB - The data presented here refer to the research article by Aleksei V. Solomonov, Yuriy S. Marfin, Alexander B. Tesler, Dmitry A. Merkushev, Elizaveta A. Bogatyreva, Elena V. Antina, Evgeniy V. Rumyantsev, and Ulyana Shimanovich “Spanning BODIPY fluorescence with self-assembled micellar clusters”, Colloids and Surfaces B: Biointerfaces, 216, 2022, 112532. The present article provides details on optical characterization for a set of meso- and tetra-substituted boron-dipyrrin (BODIPY) complexes encapsulated inside of self-assembled Triton-X-based micellar coordination clusters (MCCs), based on Triton-X family surfactants. Changes in the optical properties of the BODIPY complexes upon interaction with bovine serum albumin, in a binary mixture of THF:H2O and titrated with Triton TX-114, were evaluated. The optical properties and the formation kinetics of the BODIPY-based MCCs and the BODIPY-supported micelle chelator aggregates (MCAs) are presented as well. The presented data provide additional insights into the structural and formation aspects of both the traditional and newly obtained micellar coordination clusters for their future optimization, control, and application. The synthetic procedures for the synthesis of a set of meso- and tetra-substituted BODIPY complexes and their optical properties in different media are also presented. The research is related to the paper (Solomonov et al., 2022).

KW - BODIPY

KW - Encapsulation

KW - Fluorescent dyes

KW - Proteins

KW - Self-assembly

KW - Solubilization

KW - Surfactant micelles

KW - Synthesis

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AN - SCOPUS:85134816811

SN - 2352-3409

VL - 43

JO - Data in Brief

JF - Data in Brief

M1 - 108464

ER -

Dataset for the Synthesis of Boron-Dipyrrin Dyes, their fluorescent properties, their interaction with proteins, Triton-X-based surfactants, and micellar clusterization approaches to validation based on fluorescent dyes

Abstract

Bibliographical note

Funding

Keywords

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