TY - JOUR
T1 - A T cell repertoire timestamp is at the core of responsiveness to CTLA-4 blockade
AU - Philip, Hagit
AU - Snir, Tom
AU - Gordin, Miri
AU - Shugay, Mikhail
AU - Zilberberg, Alona
AU - Efroni, Sol
N1 - Publisher Copyright:
© 2021 The Authors
PY - 2021/2/19
Y1 - 2021/2/19
N2 - Biology of the response to anti-CTLA-4 involves the dynamics of specific T cell clones. Reasons for clinical success and failure of this treatment are still largely unknown. Here, we quantified the dynamics of the T cell receptor (TCR) repertoire, throughout 4 weeks involving treatment with anti-CTLA-4, in a syngeneic mouse model for colorectal cancer. These dynamics show an initial increase in clonality in tandem with a decrease in diversity, effects which gradually subside. Furthermore, response to treatment is tightly connected to the shared and public parts of the T cell repertoire. We were able to recognize time-dependent behaviors of specific TCR sequences and cell types and to show the response is dominated by specific motifs. We see that a single, specific time point might be useful to inform a physician of the true response to treatmentThe research further highlights the importance of temporal analyses of the immune response.
AB - Biology of the response to anti-CTLA-4 involves the dynamics of specific T cell clones. Reasons for clinical success and failure of this treatment are still largely unknown. Here, we quantified the dynamics of the T cell receptor (TCR) repertoire, throughout 4 weeks involving treatment with anti-CTLA-4, in a syngeneic mouse model for colorectal cancer. These dynamics show an initial increase in clonality in tandem with a decrease in diversity, effects which gradually subside. Furthermore, response to treatment is tightly connected to the shared and public parts of the T cell repertoire. We were able to recognize time-dependent behaviors of specific TCR sequences and cell types and to show the response is dominated by specific motifs. We see that a single, specific time point might be useful to inform a physician of the true response to treatmentThe research further highlights the importance of temporal analyses of the immune response.
KW - Cell Biology: Bioinformatics
KW - Immunology
UR - http://www.scopus.com/inward/record.url?scp=85100468486&partnerID=8YFLogxK
U2 - 10.1016/j.isci.2021.102100
DO - 10.1016/j.isci.2021.102100
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C2 - 33604527
AN - SCOPUS:85100468486
SN - 2589-0042
VL - 24
JO - iScience
JF - iScience
IS - 2
M1 - 102100
ER -