A novel Linear Code® nomenclature for complex carbohydrates

Ehud Banin, Yael Neuberger, Yaniv Altshuler, Asaf Halevi, Ori Inbar, Dotan Nir, Avinoam Dukler

Research output: Contribution to journalArticlepeer-review

70 Scopus citations

Abstract

The Linear Code is a new syntax for representing glycoconjugates and their associated molecules in a simple linear fashion. Similar to the straightforward single letter nomenclature of DNA and proteins, Linear Code presents glycoconjugates in a canonic, compact and practical form while accounting for all relevant stereochemical and structural configurations. It uses a single letter code to represent each monosaccharide and includes a condensed description of the connections between monosaccharides and their modifications, allowing a simple linear representation of these compounds. The new linear syntax enables the implementation of bioinformatics tools for investigation and analysis of glyco-molecules and their biology.

Original languageEnglish
Pages (from-to)127-137
Number of pages11
JournalTrends in Glycoscience and Glycotechnology
Volume14
Issue number77
DOIs
StatePublished - May 2002
Externally publishedYes

Keywords

  • Carbohydrates
  • Glycobiology
  • Glycomics
  • Linear Code
  • Nomenclature

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