A new lineage of foot-and-mouth disease virus serotype O in India

Saravanan Subramaniam; Punam Bisht; Jajati K. Mohapatra; Aniket Sanyal; Bramhadev Pattnaik

doi:10.12834/VetIt.106.296.2

A new lineage of foot-and-mouth disease virus serotype O in India

Translated title of the contribution: A new lineage of foot-and-mouth disease virus serotype O in India

Saravanan Subramaniam
, Punam Bisht
, Jajati K. Mohapatra
, Aniket Sanyal
, Bramhadev Pattnaik

ICAR - Project Directorate on Foot & Mouth Disease

Research output: Contribution to journal › Article › peer-review

4 Scopus citations

Abstract

The complete nucleotide sequence of a new lineage of foot and mouth disease virus (FMDV) serotype O was determined. The lineage designated as Ind2011 first appeared during 2011 in the Southern region of India. Excluding the poly C tract and poly A tail, the genome of Ind2011 ranged from 8,169 to 8,172 nucleotides. Variation in the genome length was due to insertions/deletions in LF-UTR. The lineage had a higher sequence identity with lineage PanAsia-1 at P1 and P2 regions, and with lineage PanAsia-2 at P3 and L regions. Phylogenetically, the isolates were placed closely to both PanAsia-1 and 2 lineages, and appear to be a novel variant of the PanAsian lineage.

Translated title of the contribution	A new lineage of foot-and-mouth disease virus serotype O in India
Original language	English
Pages (from-to)	145-149
Number of pages	5
Journal	Veterinaria italiana
Volume	51
Issue number	2
DOIs	https://doi.org/10.12834/VetIt.106.296.2
State	Published - 1 Apr 2015
Externally published	Yes

Bibliographical note

Publisher Copyright:
© 2015, Istituto Zooprofilattico Sperimentale dell'Abruzzo e del Molise "G.Caporale". All rights reserved.

Keywords

Foot and mouth disease virus
Ind2011
PanAsia
Serotype O

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10.12834/VetIt.106.296.2

Cite this

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abstract = "The complete nucleotide sequence of a new lineage of foot and mouth disease virus (FMDV) serotype O was determined. The lineage designated as Ind2011 first appeared during 2011 in the Southern region of India. Excluding the poly C tract and poly A tail, the genome of Ind2011 ranged from 8,169 to 8,172 nucleotides. Variation in the genome length was due to insertions/deletions in LF-UTR. The lineage had a higher sequence identity with lineage PanAsia-1 at P1 and P2 regions, and with lineage PanAsia-2 at P3 and L regions. Phylogenetically, the isolates were placed closely to both PanAsia-1 and 2 lineages, and appear to be a novel variant of the PanAsian lineage.",

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AU - Subramaniam, Saravanan

AU - Bisht, Punam

AU - Mohapatra, Jajati K.

AU - Sanyal, Aniket

AU - Pattnaik, Bramhadev

PY - 2015/4/1

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AB - The complete nucleotide sequence of a new lineage of foot and mouth disease virus (FMDV) serotype O was determined. The lineage designated as Ind2011 first appeared during 2011 in the Southern region of India. Excluding the poly C tract and poly A tail, the genome of Ind2011 ranged from 8,169 to 8,172 nucleotides. Variation in the genome length was due to insertions/deletions in LF-UTR. The lineage had a higher sequence identity with lineage PanAsia-1 at P1 and P2 regions, and with lineage PanAsia-2 at P3 and L regions. Phylogenetically, the isolates were placed closely to both PanAsia-1 and 2 lineages, and appear to be a novel variant of the PanAsian lineage.

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KW - PanAsia

KW - Serotype O

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A new lineage of foot-and-mouth disease virus serotype O in India

Abstract

Bibliographical note

Keywords

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