A comprehensive investigation of (E)-2,4-Dimethyl-6-(((2-(Phenylthio)phenyl)imino)methyl)phenol (2PTALD): Synthesis, crystal structure, and computational insights with molecular dynamic simulations

  • Manoj Kumar
  • , Seraj Ahmad
  • , V. S.Jeba Reeda
  • , Himanshu Arora
  • , Mudassar Shahid
  • , S. Muthu
  • , Nazia Siddiqui
  • , Akram Ali
  • , Saleem Javed

Research output: Contribution to journalArticlepeer-review

2 Scopus citations

Abstract

The titled compound (E)-2,4-Dimethyl-6-(((2-(Phenylthio)phenyl)imino)methyl)phenol (2PTALD) was synthesized followed by crystallization and characterized with NMR, UV and FTIR analysis. The crystal structure of 2PTALD revealed molecular geometry and compared with theoretical results and found comparable. Based on further calculations on the optimized structure - vibrational spectra, electronic characteristics and NMR spectra compared with experimental findings which given a very consistent match. MEP, ELF and thermodynamic parameters are given idea of reactivity and stability. The HOMO & LUMO found energies signifying a significant charge transfer inside the molecule. The molecular docking of 2PTALD was done with three most suitable protein with high values of binding energies. Dynamic simulations were performed using an 8W4S protein target, and analysed interaction of ligand with protein in details. Hirshfeld surface analysis offered a comprehensive visualization of intermolecular associates in the crystal structure of 2PTALD. Overall, study presents a comprehensive investigation of Schiff base ligand 2PTALD, combining experimental and computational approaches to characterize its structure, properties, and potential applications.

Original languageEnglish
Article number138761
JournalJournal of Molecular Structure
Volume1315
DOIs
StatePublished - 5 Nov 2024
Externally publishedYes

Bibliographical note

Publisher Copyright:
© 2024 Elsevier B.V.

Keywords

  • DFT
  • Hirshfeld Analysis
  • Molecular docking
  • Molecular dynamic simulation
  • NMR
  • UV–Vis

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