Research output per year
Research output per year
Personal profile
About Me
Field: Bioinformatics
Research (active tab)
1. Deep learning in computational biology
2. Computational modeling of protein-DNA and -RNA binding and gene expression regulation
3. Prediction of DNA and RNA structures
4. Predicting protein variant effects based on high-throughput data
5. Algorithms to design DNA, RNA, and amino-acid sequences
6. Data structures and algorithms to analyze high-throughput sequencing data
Expertise related to UN Sustainable Development Goals
In 2015, UN member states agreed to 17 global Sustainable Development Goals (SDGs) to end poverty, protect the planet and ensure prosperity for all. This person’s work contributes towards the following SDG(s):
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Collaborations and top research areas from the last five years
Recent external collaboration on country/territory level. Dive into details by clicking on the dots or
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Mapping the sclerostin–LRP4 binding interface identifies critical interaction hotspots in loops 1 and 3 of sclerostin
Katchkovsky, S., Meiri, R., Lacham-Hartman, S., Orenstein, Y., Levaot, N. & Papo, N., Feb 2025, In: FEBS Letters. 599, 3, p. 316-329 14 p.Research output: Contribution to journal › Article › peer-review
Open Access -
A universal system for boosting gene expression in eukaryotic cell-lines
Vaknin, I., Willinger, O., Mandl, J., Heuberger, H., Ben-Ami, D., Zeng, Y., Goldberg, S., Orenstein, Y. & Amit, R., 16 Mar 2024, In: Nature Communications. 15, 1, 2394.Research output: Contribution to journal › Article › peer-review
Open Access1 Scopus citations -
DeepCRISTL: deep transfer learning to predict CRISPR/Cas9 on-target editing efficiency in specific cellular contexts
Elkayam, S., Tziony, I. & Orenstein, Y., 2 Aug 2024, In: Bioinformatics. 40, 8, btae481.Research output: Contribution to journal › Article › peer-review
Open Access -
Deep neural networks for predicting the affinity landscape of protein-protein interactions
Meiri, R., Aharoni Lotati, S. L., Orenstein, Y. & Papo, N., 20 Sep 2024, In: iScience. 27, 9, 110772.Research output: Contribution to journal › Article › peer-review
Open Access -
FiSSC: Finding smallest sequence covers to sets of degenerate reads with applications to RNA editing
Tziony, I., Mandl, J., Shapira, K., Eisenberg, E., Porat, E. & Orenstein, Y., 16 Dec 2024, ACM-BCB 2024 - 15th ACM Conference on Bioinformatics, Computational Biology, and Health Informatics. Association for Computing Machinery, Inc, 13. (ACM-BCB 2024 - 15th ACM Conference on Bioinformatics, Computational Biology, and Health Informatics).Research output: Chapter in Book/Report/Conference proceeding › Conference contribution › peer-review
Activities
- 4 Organizing a conference, workshop, ...
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RECOMB-seq 2025
Orenstein, Y. (Organization - Program committee chair)
24 Apr 2025 → 25 Apr 2025Activity: Participating in or organizing an event › Organizing a conference, workshop, ...
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BIU Bioinformatics day
Orenstein, Y. (Organization - Program committee chair)
13 Sep 2023Activity: Participating in or organizing an event › Organizing a conference, workshop, ...
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AI and Big Data in Medical and Health Sciences
Orenstein, Y. (Organization - Program committee chair)
20 Jun 2022Activity: Participating in or organizing an event › Organizing a conference, workshop, ...
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RECOMB 2022
Orenstein, Y. (Organization - Program committee vice chair)
22 May 2022 → 25 May 2022Activity: Participating in or organizing an event › Organizing a conference, workshop, ...