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20062025

Research activity per year

Personal profile

About Me

Senior Lecturer (Assistant Professor) Principal Investigator, Laboratory for Host-Microbiome Interactions.

The intestinal immune system and the microbiome: communication networks and decision-making processes 

We study the cellular, molecular and genetic mechanisms that facilitate communication between cells of the immune system and their environment in the gut - the gut microbes (microbiome), the enteric nervous system, and intestinal epithelium, etc…

We aim to understand how these intercellular communication networks control immunological decision-making processes, between inflammation and immunological tolerance, in health and in autoimmune and chronic inflammatory diseases (such as inflammatory bowel diseases). 

We combine microscopy, genomics and molecular biology together with a unique gut organ culture system, that allow dissecting these host-environment interactions in real-time, ex-vivo (Yissachar et al., Cell, 2017).

In addition, we combine principles of systems biology, to understand how cells of the immune system process environmental signals in real-time (Yissachar et al., Molecular Cell, 2013).

Education/Academic qualification

PhD, Bar-Ilan University

Oct 2004Sep 2008

Award Date: 30 Sep 2008

Master's Degree, Bar-Ilan University

Oct 2003Sep 2004

Award Date: 30 Sep 2004

Bachelor, Bar-Ilan University

Oct 2000Sep 2003

Award Date: 30 Sep 2003

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Collaborations and top research areas from the last five years

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  • Cell-autonomous innate immunity by proteasome-derived defence peptides

    Goldberg, K., Lobov, A., Antonello, P., Shmueli, M. D., Yakir, I., Weizman, T., Ulman, A., Sheban, D., Laser, E., Kramer, M. P., Shteinvil, R., Chen, G., Ibraheem, A., Sysoeva, V., Fishbain-Yoskovitz, V., Mohapatra, G., Abramov, A., Shimshi, S., Ogneva, K. & Nandy, M. & 10 others, Amidror, S., Bootz-Maoz, H., Kuo, S. H., Dezorella, N., Kacen, A., Javitt, A., Lau, G. W., Yissachar, N., Hayouka, Z. & Merbl, Y., 27 Mar 2025, In: Nature. 639, 8056, p. 1032-1041 10 p.

    Research output: Contribution to journalArticlepeer-review

    Open Access
    61 Scopus citations
  • From microbiota to menu: predicting individual responses to dietary components

    Romano-Zadaka, H. & Yissachar, N., 8 Oct 2025, In: Gut. 74, 11, p. 1760-1762 3 p.

    Research output: Contribution to journalComment/debate

  • Gut-specific histamine 3 receptor signaling orchestrates microglia-dependent resolution of peripheral inflammation

    Dürholz, K., Ehnes, L., Linnerbauer, M., Schmid, E., Danzer, H., Hinzpeter-Schmidt, M., Lößlein, L., Amend, L., Frech, M., Azizov, V., Schälter, F., Gessner, A., Lucas, S., Lesker, T. R., Taudte, R. V., Hofmann, J., Beyer, F., Bootz-Maoz, H., Reich, Y. & Romano, H. & 15 others, Mauro, D., Beckervordersandforth, R., Kragsnaes, M. S., Ellingsen, T., Xiang, W., Haghikia, A., Akdis, C. A., Ciccia, F., Bäuerle, T., Sarter, K., Strowig, T., Yissachar, N., Schett, G., Rothhammer, V. & Zaiss, M. M., 16 Sep 2025, In: Journal of Clinical Investigation. 135, 18, e184697.

    Research output: Contribution to journalArticlepeer-review

    Open Access
    5 Scopus citations
  • Optogenetics-integrated gut organ culture system connects enteric neurons dynamics and gut homeostasis

    Naim, G., Romano-Zadaka, H., Amidror, S., Jessula Levy, D., Cohen, A., Sochen, C., Gilberg, H., Farah, N., Rudenko, V., Yarden, Y., Feng, M., Tsentsarevsky, R., Brodie, Z., Reich, Y., Simon, A., Toister, E., Shoval, I., Armon, L., Schiller, M. & Mandel, Y. & 2 others, Biton, M. & Yissachar, N., 14 Nov 2025, In: Nature Communications. 16, 1, 10010.

    Research output: Contribution to journalArticlepeer-review

    Open Access
    3 Scopus citations
  • Supplementation with short-chain fatty acids and a prebiotic improves clinical outcome in Parkinson’s disease: a randomized double-blind prospective study

    Hegelmaier, T., Duscha, A., Desel, C., Fuchs, S., Shapira, M., Amidror, S., Shan, Q., Stangl, G. I., Hirche, F., Kempa, S., Maifeld, A., Würtele, L. M., Peplinski, J., Jauk, D., Naim, G., Shidlovsky, N., Cohen, A., Bennet, Y., Paschold, L. & Dumitru, C. A. & 12 others, Obermüller-Jevic, U., Hustvedt, S. O., Timmesfeld, N., Gold, R., Zapf, A., Binder, M., Sandalcioglu, I. E., Mostaghim, S., Przuntek, H., Segal, E., Yissachar, N. & Haghikia, A., 5 Dec 2025, In: Scientific Reports. 16, 1, 315.

    Research output: Contribution to journalArticlepeer-review

    Open Access
    9 Scopus citations